WWW sites from CCP4 Workshop, January 1998

This is a first draft of a list of WWW sites arising directly from the talks at the CCP4 Workshop on "Databases for Macromolecular Crystallographers" in Reading on January 9-10, 1998.
The list is in the same order as the speakers in the conference; the list is not comprehensive but give one or two relevant links for each talk.
The Proceedings were published as a Special Issue of Acta Cryst D, who should be consulted about availability.
Errors/comments/omissions/revisions for this page to Judith Murray-Rust (ubcg09j@mail.cryst.bbk.ac.uk)


Since this list was first complied, the Protein Data Bank has started the move to the Research Collaboratory for Structural Bioinformatics (RCSB).


Neil Isaacs

CCP4 : Protein crystallography
http://www.dl.ac.uk/CCP/CCP4/main.html
Glasgow University Protein Crystallography
http://www.chem.gla.ac.uk:80/protein/

Peter Murray-Rust

Virtual School of Molecular Sciences
http://www.vsms.nottingham.ac.uk/vsms/index.html
The XML FAQ
http://www.ucc.ie/xml/

Personal Homepage
http://www.nottingham.ac.uk/~pazpmr/

Geoff Barton

The Barton group at the EBI
http://barton.ebi.ac.uk/

R Sowdhamini (Mini)

Homologous Structure Alignment Database
http://www-cryst.bioc.cam.ac.uk//data/align/
CAMbridge database of Protein Alignments organised as Structural Superfamilies
http://www-cryst.bioc.cam.ac.uk/~campass/
DDBASE - A database of protein structural domains
http://www-cryst.bioc.cam.ac.uk/~ddbase/

Christine Orengo

CATH database
http://www.biochem.ucl.ac.uk/bsm/cath/
Personal Homepage
http://www.biochem.ucl.ac.uk/~orengo/

Cyrus Chothia

Structural Classification of Proteins (SCOP)
http://scop.mrc-lmb.cam.ac.uk/scop/
Page in LMB brochure
http://www2.mrc-lmb.cam.ac.uk/brochure/Chothia,_C.html

Gerard Kleywegt

Uppsala Software Factory
http://alpha2.bmc.uu.se/~gerard/manuals/
Hetero-compound Information Centre (HIC-Up)
http://alpha2.bmc.uu.se/hicup/
Hetero-compound Search Engine Launcher (HetSEL)
http://alpha2.bmc.uu.se/~gerard/srf/hetsel.html
Personal Homepage
http://alpha2.bmc.uu.se/~gerard/
this includes a link to the full text of the talk.

Peter Keller

AutoDep 2.0 - PDB's Web-based Submission Tool (EBI site)
http://www2.ebi.ac.uk/pdb/submit_page.shtml
Personal Homepage
http://www.embl-ebi.ac.uk/ebi_docs/staff/peterk.html

Eleanor Dodson

Eleanor's Homepage
http://www.yorvic.york.ac.uk/people/92.htm
Program for the Porto meeting, 1997
http://www.itqb.unl.pt/ecm17/satellite/program.html

Tom Blundell

Heavy Atom Databank
http://bonsai.lif.icnet.uk/had/heavyatom.html
Crystallography and Biocomputing in Biochemistry, Cambridge
http://www-cryst.bioc.cam.ac.uk/

Guy Orpen

Structural Systematics in Molecular Inorganic Chemistry
(Chem. Soc. Rev. 1993, 191-197.)

http://xray.chm.bris.ac.uk:8000/research/dbase/index.html
Personal Homepage
http://www.bris.ac.uk/Depts/Chemistry/staff/gorpen.htm

Steve Gardner

IDITIS page at Oxford Molecular
http://www.oxmol.com/prods/iditis/
SEQNET quick guide
http://148.79.80.10/SEQNET/quickguide.html

Manfred Hendlich

RELIBase at the EBI
http://www2.ebi.ac.uk:8081/home.html

Robin Taylor

CCDC Homepage
http://www.ccdc.cam.ac.uk/
Personal Homepage
http://www.ccdc.cam.ac.uk/about/taylor.html

Janet Thornton

The UCL Structure and Modelling Group
http://www.biochem.ucl.ac.uk/bsm/biocomp/index.html
Susan Jones' Page (patch analysis)
http://www.biochem.ucl.ac.uk/~sue/
Protein Topology (TOPS) at the EBI
http://tops.ebi.ac.uk/tops/
CCP11 Homepage (Biosequences and Structure Analysis)
http://www.dl.ac.uk/CCP/CCP11/main.html

Barry Hardy

The Glycoscience Network Page
http://www.vei.co.uk/TGN/welcome.htm
Personal Homepage
http://www.vei.co.uk/office/barry.html

Helen Berman

Biological Structures Resource at Rutgers
http://ndb-mirror-2.rutgers.edu/
Personal Homepage
http://rutchem.rutgers.edu/faculty/berman/berman.html

Phil Bourne

The Protein Kinase Resource
http://www.sdsc.edu/Kinases/pk_home.html
The Computational Center for Macromolecular Structure
http://www.sdsc.edu/CCMS/

WPDB - The Protein Data Bank Through Microsoft Windows
http://www.sdsc.edu/pb/wpdb/wpdb.htm
The Two Crystallographers from Yorkshire Sketch
http://www.sdsc.edu/Xtal/IUCr/CC/School96/Sketch.htm

Joel Sussman

The PDB Homepage
http://www.pdb.bnl.gov/
Sussman group at the Weizmann Institute
http://www.weizmann.ac.il/~jsgrp/JLS_Group.html

Last revision date : 2 March 1999